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Package 86/98HostnameOS / ArchBUILDCHECKBUILD BIN
simpIntLists 0.99.0
Kircicegi Korkmaz
Snapshot Date: 2011-07-01 11:15:06 -0700 (Fri, 01 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/simpIntLists
Last Changed Rev: 1466 / Revision: 1675
Last Changed Date: 2011-03-24 13:25:09 -0700 (Thu, 24 Mar 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.7) / i386  OK [ OK ] OK 

Summary

Package: simpIntLists
Version: 0.99.0
Command: /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch simpIntLists_0.99.0.tar.gz
StartedAt: 2011-07-01 13:06:08 -0700 (Fri, 01 Jul 2011)
EndedAt: 2011-07-01 13:07:08 -0700 (Fri, 01 Jul 2011)
EllapsedTime: 59.8 seconds
RetCode: 0
Status:  OK 
CheckDir: simpIntLists.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.9-data-experiment/meat/simpIntLists.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-04-24 r55634)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'simpIntLists/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'simpIntLists' version '0.99.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'simpIntLists' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

simpIntLists.Rcheck/00install.out:

* installing *source* package 'simpIntLists' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'simpIntLists.Rnw' 
** testing if installed package can be loaded

* DONE (simpIntLists)

simpIntLists.Rcheck/simpIntLists-Ex.timings:

nameusersystemelapsed
ArabidopsisBioGRIDInteractionEntrezId0.1250.1140.250
ArabidopsisBioGRIDInteractionOfficial0.1050.1090.213
ArabidopsisBioGRIDInteractionUniqueId0.1060.1120.217
C.ElegansBioGRIDInteractionEntrezId0.1620.1820.344
C.ElegansBioGRIDInteractionOfficial0.1720.1810.352
C.ElegansBioGRIDInteractionUniqueId0.1760.1900.366
FruitFlyBioGRIDInteractionEntrezId0.4040.4650.871
FruitFlyBioGRIDInteractionOfficial0.4770.4940.972
FruitFlyBioGRIDInteractionUniqueId0.4480.4570.936
HumanBioGRIDInteractionEntrezId0.4660.5371.002
HumanBioGRIDInteractionOfficial0.6320.6831.317
HumanBioGRIDInteractionUniqueId0.0790.0760.155
MouseBioGRIDInteractionEntrezId0.1140.1290.257
MouseBioGRIDInteractionOfficial0.1200.1290.248
MouseBioGRIDInteractionUniqueId0.0170.0150.031
S.PombeBioGRIDInteractionEntrezId0.1900.2000.416
S.PombeBioGRIDInteractionOfficial0.1950.2130.409
S.PombeBioGRIDInteractionUniqueId0.1820.1770.474
YeastBioGRIDInteractionEntrezId1.2891.6392.957
YeastBioGRIDInteractionOfficial1.6161.7133.751
YeastBioGRIDInteractionUniqueId1.7621.8063.571
findInteractionList0.1040.1170.222
simpIntLists0.4330.1230.556