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Package 86/98HostnameOS / ArchBUILDCHECKBUILD BIN
simpIntLists 0.99.0
Kircicegi Korkmaz
Snapshot Date: 2011-07-06 11:15:18 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/simpIntLists
Last Changed Rev: 1466 / Revision: 1678
Last Changed Date: 2011-03-24 13:25:09 -0700 (Thu, 24 Mar 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: simpIntLists
Version: 0.99.0
Command: E:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --no-vignettes --timings --no-multiarch simpIntLists_0.99.0.tar.gz
StartedAt: 2011-07-06 16:14:57 -0700 (Wed, 06 Jul 2011)
EndedAt: 2011-07-06 16:15:58 -0700 (Wed, 06 Jul 2011)
EllapsedTime: 61.2 seconds
RetCode: 0
Status:  OK  
CheckDir: simpIntLists.Rcheck
Warnings: 0

Command output

* using log directory 'E:/biocbld/bbs-2.9-data-experiment/meat/simpIntLists.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-06-03 r56036)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'simpIntLists/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'simpIntLists' version '0.99.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'simpIntLists' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

simpIntLists.Rcheck/00install.out:

* installing *source* package 'simpIntLists' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'simpIntLists.Rnw' 
** testing if installed package can be loaded

* DONE (simpIntLists)

simpIntLists.Rcheck/simpIntLists-Ex.timings:

nameusersystemelapsed
ArabidopsisBioGRIDInteractionEntrezId0.040.050.17
ArabidopsisBioGRIDInteractionOfficial0.060.010.20
ArabidopsisBioGRIDInteractionUniqueId0.100.030.25
C.ElegansBioGRIDInteractionEntrezId0.110.020.25
C.ElegansBioGRIDInteractionOfficial0.090.090.36
C.ElegansBioGRIDInteractionUniqueId0.100.070.16
FruitFlyBioGRIDInteractionEntrezId0.290.070.37
FruitFlyBioGRIDInteractionOfficial0.360.080.44
FruitFlyBioGRIDInteractionUniqueId0.310.100.74
HumanBioGRIDInteractionEntrezId0.290.170.95
HumanBioGRIDInteractionOfficial0.390.031.23
HumanBioGRIDInteractionUniqueId0.060.000.08
MouseBioGRIDInteractionEntrezId0.080.030.11
MouseBioGRIDInteractionOfficial0.070.030.14
MouseBioGRIDInteractionUniqueId0.020.000.02
S.PombeBioGRIDInteractionEntrezId0.140.030.17
S.PombeBioGRIDInteractionOfficial0.130.070.19
S.PombeBioGRIDInteractionUniqueId0.170.010.20
YeastBioGRIDInteractionEntrezId0.830.381.25
YeastBioGRIDInteractionOfficial0.930.471.42
YeastBioGRIDInteractionUniqueId1.080.461.71
findInteractionList0.030.050.12
simpIntLists0.380.050.45