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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1
Package 230/247HostnameOSArchBUILDCHECKBUILD BIN

spotSegmentation

1.11.0

Chris Fraley
Last Changed Date: 2007-04-24 11:31:42 -0700
Last Changed Rev: 24217
lamb1 Linux (SUSE 10.1) x86_64  OK [ OK ]
wellington Linux (SUSE 9.2) i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) x64  OK  OK  OK 
pitt Mac OS X (10.4.10) i386  OK  OK  OK 
Package: spotSegmentation
Version: 1.11.0
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check spotSegmentation_1.11.0.tar.gz
RetCode: 0
Time: 42.6 seconds
Status: OK
CheckDir: spotSegmentation.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory '/home/biocbuild/bbs-2.1-bioc/meat/spotSegmentation.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-08-06 r42439)
* checking for file 'spotSegmentation/DESCRIPTION' ... OK
* this is package 'spotSegmentation' version '1.11.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'spotSegmentation' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
Found possibly global 'T' or 'F' in the following function:
  spotgrid
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating spotSegmentation-Ex.R ... OK
* checking examples ... OK
* creating spotSegmentation-manual.tex ... OK
* checking spotSegmentation-manual.tex ... OK

spotSegmentation.Rcheck/00install.out:

* Installing *source* package 'spotSegmentation' ...
** R
** data
** inst
** help
 >>> Building/Updating help pages for package 'spotSegmentation'
     Formats: text html latex example 
  plot.spotseg                      text    html    latex   example
  plotBlockImage                    text    html    latex   example
  spotSegTest                       text    html    latex
  spotgrid                          text    html    latex   example
  spotseg                           text    html    latex   example
  summary.spotseg                   text    html    latex   example
** building package indices ...
* DONE (spotSegmentation)