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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1
Package 90/247HostnameOSArchBUILDCHECKBUILD BIN

GeneticsDesign

1.1.0

Weiliang Qiu
Last Changed Date: 2007-04-24 11:31:42 -0700
Last Changed Rev: 24217
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) x64  OK [ OK ] OK 
pitt Mac OS X (10.4.10) i386  OK  OK  OK 
Package: GeneticsDesign
Version: 1.1.0
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check GeneticsDesign_1.1.0.tar.gz
RetCode: 0
Time: 35.6 seconds
Status: OK
CheckDir: GeneticsDesign.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.1-bioc/meat/GeneticsDesign.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-08-06 r42439)
* checking for file 'GeneticsDesign/DESCRIPTION' ... OK
* this is package 'GeneticsDesign' version '1.1.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GeneticsDesign' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
binsearch: no visible binding for global variable 'fun.lo'
binsearch: no visible binding for global variable 'fun.hi'
simu.genotype.conti: no visible binding for global variable 'x1'
simu.genotype.conti: no visible binding for global variable 'x2'
simu.genotype.conti: no visible binding for global variable 'x3'
simu.genotype.conti: no visible binding for global variable 't1'
simu.genotype.conti: no visible binding for global variable 't2'
simu.genotype.conti: no visible binding for global variable 't3'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating GeneticsDesign-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating GeneticsDesign-manual.tex ... OK
* checking GeneticsDesign-manual.tex ... OK

GeneticsDesign.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/GeneticsDesign.Rcheck


---------- Making package GeneticsDesign ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'GeneticsDesign'
     Formats: text html latex example chm 
  GPC                               text    html    latex   example chm
  gregorius                         text    html    latex   example chm
  power.casectl                     text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.1-bioc\meat\GeneticsDesign.Rcheck\00_pkg_src\GeneticsDesign\chm\GeneticsDesign.chm


Compile time: 0 minutes, 0 seconds
4	Topics
6	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.1-bioc\meat\GeneticsDesign.Rcheck\00_pkg_src\GeneticsDesign\chm\GeneticsDesign.chm, 23,457 bytes
Compression increased file by 3,605 bytes.
  preparing package GeneticsDesign for lazy loading
Loading required package: combinat

Attaching package: 'combinat'


	The following object(s) are masked from package:utils :

	 combn 

Loading required package: gdata
Loading required package: mvtnorm
  adding MD5 sums

* DONE (GeneticsDesign)