Back to the "Multiple platform build/check report"
Package 67/187 | OS | Arch | BUILD | CHECK | BUILD BIN |
GEOquery1.7.0Sean Davis | Linux (SUSE 9.2) | x86_64 | OK | WARNINGS | |
Linux (SUSE 9.2) | i686 | OK | WARNINGS | ||
Solaris 2.9 | sparc | OK | WARNINGS | ||
Linux (SUSE 10.0) | x86_64 | OK | [ WARNINGS ] | ||
Windows Server 2003 | x86_64 | OK | WARNINGS | OK |
Package: GEOquery |
Version: 1.7.0 |
Command: /home/biocbuild/1.9d/R/bin/R CMD check GEOquery_1.7.0.tar.gz |
RetCode: 0 |
Time: 83.1 seconds |
Status: WARNINGS |
CheckDir: GEOquery.Rcheck |
Warnings: 2 |
* checking for working latex ... OK * using log directory '/home/biocbuild/1.9d/Rpacks/GEOquery.Rcheck' * using R version 2.4.0 Under development (unstable) (2006-06-04 r38279) * checking for file 'GEOquery/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'GEOquery' version '1.7.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'GEOquery' can be installed ... WARNING Found the following significant warnings: missing link(s): dataTable-class * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for non-ASCII characters ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking Rd files ... OK * checking for missing documentation entries ... WARNING Undocumented code objects: Accession Columns dataTable GPLList GSMList Meta Table All user-level objects in a package should have documentation entries. See chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating GEOquery-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating GEOquery-manual.tex ... OK * checking GEOquery-manual.tex ... OK WARNING: There were 2 warnings, see /home/biocbuild/1.9d/Rpacks/GEOquery.Rcheck/00check.log for details
GEOquery.Rcheck/00install.out:
* Installing *source* package 'GEOquery' ... ** R ** inst ** help >>> Building/Updating help pages for package 'GEOquery' Formats: text html latex example GDS-class text html latex GDS2MA text html latex example GEOData-class text html latex missing link(s): dataTable-class GEODataTable-class text html latex GPL-class text html latex GSE-class text html latex GSM-class text html latex getGEO text html latex example getGEOfile text html latex example parseGEO text html latex ** building package indices ... * DONE (GEOquery)