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BioC 3.4: INSTALL report for BiocStyle on moscato1

This page was generated on 2016-09-21 03:44:56 -0700 (Wed, 21 Sep 2016).

Package 113/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiocStyle 2.1.30
Bioconductor Package Maintainer
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/BiocStyle
Last Changed Rev: 120928 / Revision: 121152
Last Changed Date: 2016-09-14 01:33:11 -0700 (Wed, 14 Sep 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BiocStyle
Version: 2.1.30
Command: rm -rf BiocStyle.buildbin-libdir && mkdir BiocStyle.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/BiocStyle_2.1.30.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=BiocStyle.buildbin-libdir --merge-multiarch BiocStyle_2.1.30.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL BiocStyle_2.1.30.zip && rm BiocStyle_2.1.30.tar.gz BiocStyle_2.1.30.zip
StartedAt: 2016-09-19 20:27:55 -0700 (Mon, 19 Sep 2016)
EndedAt: 2016-09-19 20:28:23 -0700 (Mon, 19 Sep 2016)
EllapsedTime: 28.2 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf BiocStyle.buildbin-libdir && mkdir BiocStyle.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/BiocStyle_2.1.30.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=BiocStyle.buildbin-libdir --merge-multiarch BiocStyle_2.1.30.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL BiocStyle_2.1.30.zip  && rm BiocStyle_2.1.30.tar.gz BiocStyle_2.1.30.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 50703  100 50703    0     0  10.1M      0 --:--:-- --:--:-- --:--:-- 48.3M

install for i386

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'BiocStyle/vignettes/../inst/rmarkdown/templates/html_document/skeleton/skeleton.Rmd' to 'BiocStyle/vignettes/HtmlStyle.Rmd'
* installing *source* package 'BiocStyle' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'BiocStyle/vignettes/../inst/rmarkdown/templates/html_document/skeleton/skeleton.Rmd' to 'BiocStyle/vignettes/HtmlStyle.Rmd'
* installing *source* package 'BiocStyle' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BiocStyle' as BiocStyle_2.1.30.zip
* DONE (BiocStyle)
* installing to library 'D:/biocbld/bbs-3.4-bioc/R/library'
package 'BiocStyle' successfully unpacked and MD5 sums checked