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BioC 3.4: BUILD BIN report for AnnotationDbi on moscato1

This page was generated on 2016-09-16 03:42:05 -0700 (Fri, 16 Sep 2016).

Package 47/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnnotationDbi 1.35.4
Bioconductor Package Maintainer
Snapshot Date: 2016-09-14 19:15:30 -0700 (Wed, 14 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/AnnotationDbi
Last Changed Rev: 119165 / Revision: 120967
Last Changed Date: 2016-07-06 02:58:16 -0700 (Wed, 06 Jul 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: AnnotationDbi
Version: 1.35.4
Command: cd AnnotationDbi.buildbin-libdir/AnnotationDbi && zip -r ../../AnnotationDbi_1.35.4.zip . & cd ../..
StartedAt: 2016-09-15 18:53:38 -0700 (Thu, 15 Sep 2016)
EndedAt: 2016-09-15 18:54:11 -0700 (Thu, 15 Sep 2016)
EllapsedTime: 33.8 seconds
RetCode: 0
Status:  OK  
PackageFile: AnnotationDbi_1.35.4.zip
PackageFileSize: 9.06 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd AnnotationDbi.buildbin-libdir/AnnotationDbi && zip -r ../../AnnotationDbi_1.35.4.zip . & cd ../..
###
##############################################################################
##############################################################################


Scanning files 
  adding: DBschemas/ (208 bytes security) (stored 0%)
  adding: DBschemas/SchemaGuidelines.txt (188 bytes security) (deflated 53%)
  adding: DBschemas/schemas_0.9/ (208 bytes security) (stored 0%)
  adding: DBschemas/schemas_0.9/00README.TXT (188 bytes security) (deflated 41%)
  adding: DBschemas/schemas_0.9/ARABIDOPSISCHIP_DB.sql (188 bytes security) (deflated 80%)
  adding: DBschemas/schemas_0.9/DataTypes.txt (188 bytes security) (deflated 71%)
  adding: DBschemas/schemas_0.9/FLYCHIP_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_0.9/FLY_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_0.9/GO_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_0.9/HUMANCHIP_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_0.9/HUMAN_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_0.9/KEGG_DB.sql (188 bytes security) (deflated 63%)
  adding: DBschemas/schemas_0.9/RODENTCHIP_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_0.9/RODENT_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_0.9/YEASTCHIP_DB.sql (188 bytes security) (deflated 80%)
  adding: DBschemas/schemas_0.9/YEAST_DB.sql (188 bytes security) (deflated 81%)
  adding: DBschemas/schemas_1.0/ (208 bytes security) (stored 0%)
  adding: DBschemas/schemas_1.0/00README.TXT (188 bytes security) (deflated 56%)
  adding: DBschemas/schemas_1.0/ARABIDOPSISCHIP_DB.sql (188 bytes security) (deflated 80%)
  adding: DBschemas/schemas_1.0/BOVINECHIP_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_1.0/BOVINE_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_1.0/CANINECHIP_DB.sql (188 bytes security) (deflated 76%)
  adding: DBschemas/schemas_1.0/CANINE_DB.sql (188 bytes security) (deflated 76%)
  adding: DBschemas/schemas_1.0/CHICKENCHIP_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_1.0/CHICKEN_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_1.0/DataTypes.txt (188 bytes security) (deflated 71%)
  adding: DBschemas/schemas_1.0/ECOLICHIP_DB.sql (188 bytes security) (deflated 81%)
  adding: DBschemas/schemas_1.0/ECOLI_DB.sql (188 bytes security) (deflated 81%)
  adding: DBschemas/schemas_1.0/FLYCHIP_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_1.0/FLY_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_1.0/GO_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_1.0/HUMANCHIP_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_1.0/HUMANCROSSCHIP_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_1.0/HUMAN_DB.sql (188 bytes security) (deflated 84%)
  adding: DBschemas/schemas_1.0/INPARANOIDDROME_DB.sql (188 bytes security) (deflated 90%)
  adding: DBschemas/schemas_1.0/INPARANOIDHOMSA_DB.sql (188 bytes security) (deflated 90%)
  adding: DBschemas/schemas_1.0/INPARANOIDMUSMU_DB.sql (188 bytes security) (deflated 90%)
  adding: DBschemas/schemas_1.0/INPARANOIDRATNO_DB.sql (188 bytes security) (deflated 90%)
  adding: DBschemas/schemas_1.0/INPARANOIDSACCE_DB.sql (188 bytes security) (deflated 90%)
  adding: DBschemas/schemas_1.0/KEGG_DB.sql (188 bytes security) (deflated 63%)
  adding: DBschemas/schemas_1.0/MALARIA_DB.sql (188 bytes security) (deflated 80%)
  adding: DBschemas/schemas_1.0/MOUSECHIP_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_1.0/MOUSE_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_1.0/PFAM_DB.sql (188 bytes security) (deflated 76%)
  adding: DBschemas/schemas_1.0/PIGCHIP_DB.sql (188 bytes security) (deflated 76%)
  adding: DBschemas/schemas_1.0/PIG_DB.sql (188 bytes security) (deflated 76%)
  adding: DBschemas/schemas_1.0/RATCHIP_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_1.0/RAT_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_1.0/WORMCHIP_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_1.0/WORM_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_1.0/YEASTCHIP_DB.sql (188 bytes security) (deflated 80%)
  adding: DBschemas/schemas_1.0/YEAST_DB.sql (188 bytes security) (deflated 81%)
  adding: DBschemas/schemas_1.0/ZEBRAFISHCHIP_DB.sql (188 bytes security) (deflated 82%)
  adding: DBschemas/schemas_1.0/ZEBRAFISH_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_2.0/ (208 bytes security) (stored 0%)
  adding: DBschemas/schemas_2.0/00README.TXT (188 bytes security) (deflated 45%)
  adding: DBschemas/schemas_2.0/ANOPHELES_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.0/ARABIDOPSISCHIP_DB.sql (188 bytes security) (deflated 55%)
  adding: DBschemas/schemas_2.0/ARABIDOPSIS_DB.sql (188 bytes security) (deflated 84%)
  adding: DBschemas/schemas_2.0/BOVINECHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.0/BOVINE_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.0/CANINECHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.0/CANINE_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.0/CHICKENCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.0/CHICKEN_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.0/CHIMP_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.0/DataTypes.txt (188 bytes security) (deflated 71%)
  adding: DBschemas/schemas_2.0/ECOLI_DB.sql (188 bytes security) (deflated 84%)
  adding: DBschemas/schemas_2.0/FLYCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.0/FLY_DB.sql (188 bytes security) (deflated 85%)
  adding: DBschemas/schemas_2.0/GO_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_2.0/HUMANCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.0/HUMAN_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.0/INPARANOID_DB.sql (188 bytes security) (deflated 88%)
  adding: DBschemas/schemas_2.0/KEGG_DB.sql (188 bytes security) (deflated 65%)
  adding: DBschemas/schemas_2.0/MALARIA_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_2.0/MOUSECHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.0/MOUSE_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.0/PFAM_DB.sql (188 bytes security) (deflated 76%)
  adding: DBschemas/schemas_2.0/PIG_DB.sql (188 bytes security) (deflated 85%)
  adding: DBschemas/schemas_2.0/RATCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.0/RAT_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.0/RHESUS_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.0/WORMCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.0/WORM_DB.sql (188 bytes security) (deflated 85%)
  adding: DBschemas/schemas_2.0/XENOPUSCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.0/XENOPUS_DB.sql (188 bytes security) (deflated 84%)
  adding: DBschemas/schemas_2.0/YEASTCHIP_DB.sql (188 bytes security) (deflated 55%)
  adding: DBschemas/schemas_2.0/YEAST_DB.sql (188 bytes security) (deflated 84%)
  adding: DBschemas/schemas_2.0/ZEBRAFISHCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.0/ZEBRAFISH_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/ (208 bytes security) (stored 0%)
  adding: DBschemas/schemas_2.1/00README.TXT (188 bytes security) (deflated 45%)
  adding: DBschemas/schemas_2.1/ANOPHELES_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/ARABIDOPSISCHIP_DB.sql (188 bytes security) (deflated 55%)
  adding: DBschemas/schemas_2.1/ARABIDOPSIS_DB.sql (188 bytes security) (deflated 84%)
  adding: DBschemas/schemas_2.1/BOVINECHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.1/BOVINE_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/CANINECHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.1/CANINE_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/CHICKENCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.1/CHICKEN_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/CHIMP_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/COELICOLOR_DB.sql (188 bytes security) (deflated 76%)
  adding: DBschemas/schemas_2.1/DataTypes.txt (188 bytes security) (deflated 71%)
  adding: DBschemas/schemas_2.1/ECOLI_DB.sql (188 bytes security) (deflated 84%)
  adding: DBschemas/schemas_2.1/FLYCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.1/FLY_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/GO_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_2.1/HUMANCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.1/HUMAN_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/INPARANOID_DB.sql (188 bytes security) (deflated 90%)
  adding: DBschemas/schemas_2.1/KEGG_DB.sql (188 bytes security) (deflated 65%)
  adding: DBschemas/schemas_2.1/MALARIA_DB.sql (188 bytes security) (deflated 83%)
  adding: DBschemas/schemas_2.1/MOUSECHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.1/MOUSE_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/PFAM_DB.sql (188 bytes security) (deflated 76%)
  adding: DBschemas/schemas_2.1/PIG_DB.sql (188 bytes security) (deflated 85%)
  adding: DBschemas/schemas_2.1/RATCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.1/RAT_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/RHESUS_DB.sql (188 bytes security) (deflated 86%)
  adding: DBschemas/schemas_2.1/WORMCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.1/WORM_DB.sql (188 bytes security) (deflated 85%)
  adding: DBschemas/schemas_2.1/XENOPUSCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.1/XENOPUS_DB.sql (188 bytes security) (deflated 84%)
  adding: DBschemas/schemas_2.1/YEASTCHIP_DB.sql (188 bytes security) (deflated 55%)
  adding: DBschemas/schemas_2.1/YEAST_DB.sql (188 bytes security) (deflated 85%)
  adding: DBschemas/schemas_2.1/ZEBRAFISHCHIP_DB.sql (188 bytes security) (deflated 58%)
  adding: DBschemas/schemas_2.1/ZEBRAFISH_DB.sql (188 bytes security) (deflated 86%)
  adding: DESCRIPTION (188 bytes security) (deflated 54%)
  adding: doc/ (208 bytes security) (stored 0%)
  adding: doc/AnnotationDbi.pdf (188 bytes security) (deflated 13%)
  adding: doc/AnnotationDbi.R (188 bytes security) (deflated 74%)
  adding: doc/AnnotationDbi.Rnw (188 bytes security) (deflated 65%)
  adding: doc/index.html (188 bytes security) (deflated 69%)
  adding: doc/IntroToAnnotationPackages.pdf (188 bytes security) (deflated 10%)
  adding: doc/IntroToAnnotationPackages.R (188 bytes security) (deflated 75%)
  adding: doc/IntroToAnnotationPackages.Rnw (188 bytes security) (deflated 64%)
  adding: extdata/ (208 bytes security) (stored 0%)
  adding: extdata/hcg110_ID (188 bytes security) (deflated 62%)
  adding: extdata/HG-U95Av2_probe_tab.gz (188 bytes security) (deflated 0%)
  adding: extdata/hgu95av2_ID (188 bytes security) (deflated 65%)
  adding: extdata/Inp_species_mapping (188 bytes security) (deflated 64%)
  adding: extdata/manyToOneBlackList.Rda (188 bytes security) (stored 0%)
  adding: extdata/org.testing.db/ (208 bytes security) (stored 0%)
  adding: extdata/org.testing.db/DESCRIPTION (188 bytes security) (deflated 49%)
  adding: extdata/org.testing.db/inst/ (208 bytes security) (stored 0%)
  adding: extdata/org.testing.db/inst/extdata/ (208 bytes security) (stored 0%)
  adding: extdata/org.testing.db/inst/extdata/org.testing.sqlite (188 bytes security) (deflated 78%)
  adding: extdata/org.testing.db/man/ (208 bytes security) (stored 0%)
  adding: extdata/org.testing.db/man/org.TguttataTestingSubset.egBASE.Rd (188 bytes security) (deflated 54%)
  adding: extdata/org.testing.db/man/org.TguttataTestingSubset.egORGANISM.Rd (188 bytes security) (deflated 57%)
  adding: extdata/org.testing.db/man/org.TguttataTestingSubset.eg_dbconn.Rd (188 bytes security) (deflated 69%)
  adding: extdata/org.testing.db/NAMESPACE (188 bytes security) (deflated 44%)
  adding: extdata/org.testing.db/R/ (208 bytes security) (stored 0%)
  adding: extdata/org.testing.db/R/zzz.R (188 bytes security) (deflated 58%)
  adding: extdata/resultTable.Rda (188 bytes security) (stored 0%)
  adding: help/ (208 bytes security) (stored 0%)
  adding: help/aliases.rds (188 bytes security) (stored 0%)
  adding: help/AnIndex (188 bytes security) (deflated 82%)
  adding: help/AnnotationDbi.rdb (188 bytes security) (deflated 1%)
  adding: help/AnnotationDbi.rdx (188 bytes security) (stored 0%)
  adding: help/paths.rds (188 bytes security) (stored 0%)
  adding: html/ (208 bytes security) (stored 0%)
  adding: html/00Index.html (188 bytes security) (deflated 92%)
  adding: html/R.css (188 bytes security) (deflated 75%)
  adding: INDEX (188 bytes security) (deflated 66%)
  adding: MD5 (188 bytes security) (deflated 67%)
  adding: Meta/ (208 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (188 bytes security) (deflated 0%)
  adding: Meta/links.rds (188 bytes security) (deflated 1%)
  adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
  adding: Meta/package.rds (188 bytes security) (stored 0%)
  adding: Meta/Rd.rds (188 bytes security) (stored 0%)
  adding: Meta/vignette.rds (188 bytes security) (stored 0%)
  adding: NAMESPACE (188 bytes security) (deflated 63%)
  adding: NEWS (188 bytes security) (deflated 64%)
  adding: NOTES-Herve (188 bytes security) (deflated 50%)
  adding: R/ (208 bytes security) (stored 0%)
  adding: R/AnnotationDbi (188 bytes security) (deflated 41%)
  adding: R/AnnotationDbi.rdb (188 bytes security) (deflated 30%)
  adding: R/AnnotationDbi.rdx (188 bytes security) (deflated 2%)
  adding: script/ (208 bytes security) (stored 0%)
  adding: script/generateMultiCols.R (188 bytes security) (deflated 60%)
  adding: TODO (188 bytes security) (deflated 29%)
  adding: unitTests/ (208 bytes security) (stored 0%)
  adding: unitTests/test_bimap.R (188 bytes security) (deflated 75%)
  adding: unitTests/test_geneCentricDbs.R (188 bytes security) (deflated 41%)
  adding: unitTests/test_mapIds.R (188 bytes security) (deflated 74%)
  adding: unitTests/test_select.R (188 bytes security) (deflated 74%)
  adding: unitTests/test_select_inparanoid.R (188 bytes security) (deflated 79%)
  adding: unitTests/test_select_NOSCHEMA.R (188 bytes security) (deflated 72%)
  adding: unitTests/test_select_reactome.R (188 bytes security) (deflated 75%)