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BioC 3.2: BUILD report for spliceSites on perceval

This page was generated on 2015-10-27 17:35:57 -0400 (Tue, 27 Oct 2015).

Package 1009/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
spliceSites 1.8.0
Wolfgang Kaisers
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/spliceSites
Last Changed Rev: 109589 / Revision: 109947
Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded [ ERROR ] skipped  skipped 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: spliceSites
Version: 1.8.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data spliceSites
StartedAt: 2015-10-26 23:16:57 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 23:17:03 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 6.0 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data spliceSites
###
##############################################################################
##############################################################################


* checking for file ‘spliceSites/DESCRIPTION’ ... OK
* preparing ‘spliceSites’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies ‘rbamtools’, ‘refGenome’ are not available for package ‘spliceSites’
* removing ‘/private/tmp/RtmpPku1jm/Rinst11b2f37ad2f11/spliceSites’
      -----------------------------------
ERROR: package installation failed