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BioC 3.2: BUILD BIN report for ProteomicsAnnotationHubData on oaxaca

This page was generated on 2015-10-27 17:42:42 -0400 (Tue, 27 Oct 2015).

Package 808/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ProteomicsAnnotationHubData 1.0.0
Laurent Gatto
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ProteomicsAnnotationHubData
Last Changed Rev: 109589 / Revision: 109947
Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  ERROR  skipped  skipped 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: ProteomicsAnnotationHubData
Version: 1.0.0
Command: rm -rf ProteomicsAnnotationHubData.buildbin-libdir && mkdir ProteomicsAnnotationHubData.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ProteomicsAnnotationHubData_1.0.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ProteomicsAnnotationHubData.buildbin-libdir
StartedAt: 2015-10-27 11:02:18 -0400 (Tue, 27 Oct 2015)
EndedAt: 2015-10-27 11:02:53 -0400 (Tue, 27 Oct 2015)
EllapsedTime: 35.1 seconds
RetCode: 0
Status:  OK 
PackageFile: ProteomicsAnnotationHubData_1.0.0.tgz
PackageFileSize: 80.46 KiB

Command output

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###
### Running command:
###
###   rm -rf ProteomicsAnnotationHubData.buildbin-libdir && mkdir ProteomicsAnnotationHubData.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ProteomicsAnnotationHubData_1.0.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ProteomicsAnnotationHubData.buildbin-libdir
###
##############################################################################
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=ProteomicsAnnotationHubData.buildbin-libdir ProteomicsAnnotationHubData_1.0.0.tar.gz'
>>>>>>> 

* installing *source* package ‘ProteomicsAnnotationHubData’ ...
** R
** inst
** preparing package for lazy loading
Note: the specification for S3 class “AsIs” in package ‘jsonlite’ seems equivalent to one from package ‘BiocGenerics’: not turning on duplicate class definitions for this class.
erwinia_carotovora.fasta
F063721.dat-mztab.txt
PXD000001
TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01-20141210.mzML
INFO [2015-10-27 11:02:38] Preparer Class: PXD000001FastaToAAStringSetPreparer
INFO [2015-10-27 11:02:39] Preparer Class: PXD000001MzTabToMSnSetPreparer
INFO [2015-10-27 11:02:39] Preparer Class: PXD000001MzMLToMzRPwizPreparer
INFO [2015-10-27 11:02:39] Preparer Class: PXD000001MzidToMzRidentPreparer
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Note: the specification for S3 class “AsIs” in package ‘jsonlite’ seems equivalent to one from package ‘BiocGenerics’: not turning on duplicate class definitions for this class.
* DONE (ProteomicsAnnotationHubData)