BioC 3.2: CHECK report for HilbertCurve on oaxaca

Package: HilbertCurve

Version: 0.99.2

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings HilbertCurve_0.99.2.tar.gz

StartedAt: 2015-08-24 00:50:53 -0700 (Mon, 24 Aug 2015)

EndedAt: 2015-08-24 00:53:03 -0700 (Mon, 24 Aug 2015)

EllapsedTime: 130.4 seconds

RetCode: 0

Status:  OK

CheckDir: HilbertCurve.Rcheck

Warnings: 0

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings HilbertCurve_0.99.2.tar.gz
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* using log directory ‘/Users/biocbuild/bbs-3.2-bioc/meat/HilbertCurve.Rcheck’
* using R version 3.2.2 (2015-08-14)
* using platform: x86_64-apple-darwin13.4.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘HilbertCurve/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘HilbertCurve’ version ‘0.99.2’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘HilbertCurve’ can be installed ... [9s/9s] OK
* checking installed package size ... NOTE
  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    doc   5.4Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [27s/28s] OK
Examples with CPU or elapsed time > 5s
                               user system elapsed
hc_layer-HilbertCurve-method 14.176  0.551  14.951
hc_png-HilbertCurve-method    6.474  0.221   6.861
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘test-all.R’ [5s/5s]
 [5s/5s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/Users/biocbuild/bbs-3.2-bioc/meat/HilbertCurve.Rcheck/00check.log’
for details.

* installing *source* package ‘HilbertCurve’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (HilbertCurve)

name	user	system	elapsed
HilbertCurve-class	0	0	0
HilbertCurve	0.630	0.016	0.906
hc_layer-HilbertCurve-method	14.176	0.551	14.951
hc_level-HilbertCurve-method	0.036	0.001	0.037
hc_normal_points-HilbertCurve-method	0.001	0.000	0.000
hc_png-HilbertCurve-method	6.474	0.221	6.861
hc_points-HilbertCurve-method	0.863	0.019	1.056
hc_rect-HilbertCurve-method	0.066	0.001	0.067
hc_segmented_points-HilbertCurve-method	0.001	0.000	0.001
hc_segments-HilbertCurve-method	0.122	0.001	0.123
hc_text-HilbertCurve-method	0.044	0.001	0.046
show-HilbertCurve-method	0.000	0.000	0.001
unzoom-HilbertCurve-method	0.013	0.001	0.014
zoom-HilbertCurve-method	0.010	0.001	0.019