Britta Velten
| Snapshot Date: 2024-06-26 14:00 -0400 (Wed, 26 Jun 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_19 |
| git_last_commit: a4dfa52 |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-06-28 17:45 -0400 (Fri, 28 Jun 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4760 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 (2024-04-24 ucrt) -- "Puppy Cup" | 4494 |
| merida1 | macOS 12.7.4 Monterey | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4508 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4466 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4362 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 908/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.20.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.4 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.20.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.20.0.tar.gz |
| StartedAt: 2024-06-27 22:01:14 -0400 (Thu, 27 Jun 2024) |
| EndedAt: 2024-06-27 22:02:26 -0400 (Thu, 27 Jun 2024) |
| EllapsedTime: 71.5 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: graper.Rcheck |
| Warnings: 1 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R version 4.4.0 (2024-04-24)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.6.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.20.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
# warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 3 NOTEs
See
‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
# warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
^
1 warning generated.
clang++ -arch arm64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.0 (2024-04-24) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-876.694
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-575.495
ELB improved by 301.199
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.747
ELB improved by 54.7475
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.921
ELB improved by 33.827
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.372
ELB improved by 15.5483
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.739
ELB improved by 6.633
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.799
ELB improved by 3.93994
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.438
ELB improved by 3.36111
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.194
ELB improved by 3.24431
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.93
ELB improved by 3.26426
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.618
ELB improved by 3.31137
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.35
ELB improved by 3.26776
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.333
ELB improved by 3.0176
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.794
ELB improved by 2.53917
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.851
ELB improved by 1.94308
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.465
ELB improved by 1.38521
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.507
ELB improved by 0.95884
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.834
ELB improved by 0.672214
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.345
ELB improved by 0.489222
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.975
ELB improved by 0.370261
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.686
ELB improved by 0.288909
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.455
ELB improved by 0.230907
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.267
ELB improved by 0.188476
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.11
ELB improved by 0.156756
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.977
ELB improved by 0.132526
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.864
ELB improved by 0.113685
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.765
ELB improved by 0.0988439
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.678
ELB improved by 0.0870248
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.6
ELB improved by 0.0774995
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.531
ELB improved by 0.069716
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.467
ELB improved by 0.063261
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.409
ELB improved by 0.0578312
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.356
ELB improved by 0.053206
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.307
ELB improved by 0.0492246
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.261
ELB improved by 0.0457685
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.218
ELB improved by 0.0427483
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.178
ELB improved by 0.0400952
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.141
ELB improved by 0.0377548
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.105
ELB improved by 0.0356836
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.071
ELB improved by 0.0338457
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.039
ELB improved by 0.0322117
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.008
ELB improved by 0.0307565
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.979
ELB improved by 0.0294595
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.95
ELB improved by 0.0283027
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.923
ELB improved by 0.0272711
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.897
ELB improved by 0.0263518
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.871
ELB improved by 0.0255337
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.846
ELB improved by 0.0248075
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.822
ELB improved by 0.0241655
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.799
ELB improved by 0.0236009
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.776
ELB improved by 0.0231085
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.753
ELB improved by 0.022684
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.731
ELB improved by 0.0223243
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.709
ELB improved by 0.0220275
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.687
ELB improved by 0.0217926
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.665
ELB improved by 0.0216199
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.644
ELB improved by 0.0215109
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.622
ELB improved by 0.0214687
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.601
ELB improved by 0.0214981
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.579
ELB improved by 0.0216055
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.557
ELB improved by 0.0218
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.535
ELB improved by 0.0220934
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.513
ELB improved by 0.0225006
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.49
ELB improved by 0.0230407
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.466
ELB improved by 0.023737
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.441
ELB improved by 0.0246184
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.416
ELB improved by 0.0257189
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.388
ELB improved by 0.0270779
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.36
ELB improved by 0.0287389
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.329
ELB improved by 0.0307464
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.296
ELB improved by 0.0331397
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.26
ELB improved by 0.035943
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.221
ELB improved by 0.0391476
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.178
ELB improved by 0.042688
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.132
ELB improved by 0.0464141
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.082
ELB improved by 0.0500772
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.028
ELB improved by 0.0533622
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.972
ELB improved by 0.0559871
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.914
ELB improved by 0.0578411
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.855
ELB improved by 0.0590597
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.795
ELB improved by 0.0599617
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.734
ELB improved by 0.0608934
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.672
ELB improved by 0.0621028
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.609
ELB improved by 0.0637106
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.543
ELB improved by 0.0657506
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.475
ELB improved by 0.0682215
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.404
ELB improved by 0.0711231
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.329
ELB improved by 0.0744747
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.251
ELB improved by 0.0783259
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.168
ELB improved by 0.0827691
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.08
ELB improved by 0.0879621
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.986
ELB improved by 0.094161
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.884
ELB improved by 0.101762
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.773
ELB improved by 0.111313
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.649
ELB improved by 0.1234
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.511
ELB improved by 0.138163
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.357
ELB improved by 0.154342
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.188
ELB improved by 0.168633
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.011
ELB improved by 0.177455
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.83
ELB improved by 0.180787
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.647
ELB improved by 0.18305
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.457
ELB improved by 0.189554
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.255
ELB improved by 0.202113
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.041
ELB improved by 0.214391
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.828
ELB improved by 0.212399
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.638
ELB improved by 0.189994
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.481
ELB improved by 0.157904
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.352
ELB improved by 0.128539
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.246
ELB improved by 0.106107
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.156
ELB improved by 0.0899241
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.078
ELB improved by 0.0781921
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.009
ELB improved by 0.0692933
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.947
ELB improved by 0.0620056
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.891
ELB improved by 0.0555007
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.842
ELB improved by 0.0493494
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.798
ELB improved by 0.0435045
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.76
ELB improved by 0.0381796
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.726
ELB improved by 0.0336403
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.696
ELB improved by 0.0300211
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.669
ELB improved by 0.0272543
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.644
ELB improved by 0.0251056
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.621
ELB improved by 0.0232673
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.599
ELB improved by 0.0214619
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.58
ELB improved by 0.0195253
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.562
ELB improved by 0.0174382
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.547
ELB improved by 0.015296
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.534
ELB improved by 0.0132404
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.522
ELB improved by 0.0113927
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.513
ELB improved by 0.00981945
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-864.59
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.994
ELB improved by 281.596
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.636
ELB improved by 56.3587
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.738
ELB improved by 39.8975
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.389
ELB improved by 20.3494
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.464
ELB improved by 8.92521
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.813
ELB improved by 4.65054
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.202
ELB improved by 3.61132
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.744
ELB improved by 3.45815
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.136
ELB improved by 3.60768
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.276
ELB improved by 3.85972
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.234
ELB improved by 4.04215
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.28
ELB improved by 3.95362
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.793
ELB improved by 3.48772
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.023
ELB improved by 2.76958
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.967
ELB improved by 2.05601
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.451
ELB improved by 1.51647
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.288
ELB improved by 1.16306
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.361
ELB improved by 0.926198
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.625
ELB improved by 0.736193
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.058
ELB improved by 0.566975
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.629
ELB improved by 0.428882
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.3
ELB improved by 0.329597
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.038
ELB improved by 0.262028
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.822
ELB improved by 0.215228
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.641
ELB improved by 0.181179
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.486
ELB improved by 0.155141
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.352
ELB improved by 0.134447
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.234
ELB improved by 0.117549
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.131
ELB improved by 0.103492
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.039
ELB improved by 0.0916423
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.957
ELB improved by 0.0815548
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.885
ELB improved by 0.0728991
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.819
ELB improved by 0.0654233
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.76
ELB improved by 0.0589299
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.707
ELB improved by 0.0532616
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.659
ELB improved by 0.0482911
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.615
ELB improved by 0.0439149
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.575
ELB improved by 0.0400474
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.538
ELB improved by 0.0366178
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.505
ELB improved by 0.0335667
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.474
ELB improved by 0.0308446
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.445
ELB improved by 0.0284092
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.419
ELB improved by 0.0262249
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.395
ELB improved by 0.0242613
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.372
ELB improved by 0.022492
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.351
ELB improved by 0.0208948
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.332
ELB improved by 0.01945
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.314
ELB improved by 0.0181407
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.297
ELB improved by 0.0169524
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.281
ELB improved by 0.015872
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.266
ELB improved by 0.0148884
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.252
ELB improved by 0.0139916
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.239
ELB improved by 0.0131729
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.227
ELB improved by 0.0124245
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.215
ELB improved by 0.0117396
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.204
ELB improved by 0.0111121
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.193
ELB improved by 0.0105365
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.183
ELB improved by 0.0100082
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.174
ELB improved by 0.0095226
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-850.695
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.69
ELB improved by 267.005
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.833
ELB improved by 60.8571
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.2
ELB improved by 47.6326
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.455
ELB improved by 24.7449
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.648
ELB improved by 9.80712
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.155
ELB improved by 5.49279
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.797
ELB improved by 4.35853
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.622
ELB improved by 4.17506
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.24
ELB improved by 4.38171
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.455
ELB improved by 4.78522
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.244
ELB improved by 5.21053
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.925
ELB improved by 5.31919
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.135
ELB improved by 4.79046
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.339
ELB improved by 3.7959
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.607
ELB improved by 2.73137
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.812
ELB improved by 1.79575
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.659
ELB improved by 1.15275
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.874
ELB improved by 0.784508
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.289
ELB improved by 0.584864
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.815
ELB improved by 0.474132
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.407
ELB improved by 0.408769
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.039
ELB improved by 0.36711
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.701
ELB improved by 0.338367
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.384
ELB improved by 0.316959
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.084
ELB improved by 0.299915
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.798
ELB improved by 0.285666
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.525
ELB improved by 0.273448
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.262
ELB improved by 0.262973
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.008
ELB improved by 0.254212
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.761
ELB improved by 0.247258
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.518
ELB improved by 0.242234
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.279
ELB improved by 0.239232
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.041
ELB improved by 0.238286
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.802
ELB improved by 0.239349
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.559
ELB improved by 0.242289
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.312
ELB improved by 0.246878
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.06
ELB improved by 0.252772
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.8
ELB improved by 0.259488
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.534
ELB improved by 0.266379
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.261
ELB improved by 0.272613
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.984
ELB improved by 0.277176
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.705
ELB improved by 0.278932
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.428
ELB improved by 0.276758
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.158
ELB improved by 0.269763
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.901
ELB improved by 0.257556
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.66
ELB improved by 0.240447
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.441
ELB improved by 0.219472
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.245
ELB improved by 0.196179
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.073
ELB improved by 0.172258
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.923
ELB improved by 0.149178
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.795
ELB improved by 0.12797
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.686
ELB improved by 0.109184
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.593
ELB improved by 0.092978
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.514
ELB improved by 0.0792452
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.446
ELB improved by 0.0677362
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.388
ELB improved by 0.0581443
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.338
ELB improved by 0.0501584
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.294
ELB improved by 0.0434919
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.257
ELB improved by 0.0378957
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.223
ELB improved by 0.0331624
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.194
ELB improved by 0.0291253
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.169
ELB improved by 0.0256539
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.146
ELB improved by 0.0226482
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.126
ELB improved by 0.0200322
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.108
ELB improved by 0.0177482
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.092
ELB improved by 0.0157512
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.078
ELB improved by 0.0140051
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.066
ELB improved by 0.0124796
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.055
ELB improved by 0.0111483
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.045
ELB improved by 0.009988
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-840.633
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-549.16
ELB improved by 291.473
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.399
ELB improved by 58.7614
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.909
ELB improved by 33.4892
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.108
ELB improved by 12.8017
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.09
ELB improved by 6.01793
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.85
ELB improved by 4.23987
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.255
ELB improved by 3.59481
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.886
ELB improved by 3.36885
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.624
ELB improved by 3.26199
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.49
ELB improved by 3.13458
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.58
ELB improved by 2.90927
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.021
ELB improved by 2.55986
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.894
ELB improved by 2.12653
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.202
ELB improved by 1.69227
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.878
ELB improved by 1.32375
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.841
ELB improved by 1.03738
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.023
ELB improved by 0.817622
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.375
ELB improved by 0.648132
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.854
ELB improved by 0.52071
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.423
ELB improved by 0.431086
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.05
ELB improved by 0.37347
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.712
ELB improved by 0.338064
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.4
ELB improved by 0.311874
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.117
ELB improved by 0.283011
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.869
ELB improved by 0.247463
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.659
ELB improved by 0.209999
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.482
ELB improved by 0.177194
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.33
ELB improved by 0.152026
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.196
ELB improved by 0.134068
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.074
ELB improved by 0.121654
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.961
ELB improved by 0.113206
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.853
ELB improved by 0.107604
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.749
ELB improved by 0.104139
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.647
ELB improved by 0.102383
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.545
ELB improved by 0.102093
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.442
ELB improved by 0.103141
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.336
ELB improved by 0.105486
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.227
ELB improved by 0.109143
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.113
ELB improved by 0.114182
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.992
ELB improved by 0.120724
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.863
ELB improved by 0.128939
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.724
ELB improved by 0.139059
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.573
ELB improved by 0.151386
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.406
ELB improved by 0.166309
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.222
ELB improved by 0.184333
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.016
ELB improved by 0.206114
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.783
ELB improved by 0.232526
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.519
ELB improved by 0.264775
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.214
ELB improved by 0.304604
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.859
ELB improved by 0.354657
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.44
ELB improved by 0.419069
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.936
ELB improved by 0.503909
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.322
ELB improved by 0.61477
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.58
ELB improved by 0.742186
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.743
ELB improved by 0.836182
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.898
ELB improved by 0.844901
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.102
ELB improved by 0.795967
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.373
ELB improved by 0.729782
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.72
ELB improved by 0.652589
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.151
ELB improved by 0.568733
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.662
ELB improved by 0.489071
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.241
ELB improved by 0.421462
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.88
ELB improved by 0.361269
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.582
ELB improved by 0.297149
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.352
ELB improved by 0.230378
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.179
ELB improved by 0.172895
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.049
ELB improved by 0.129887
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.95
ELB improved by 0.0990269
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.874
ELB improved by 0.0767155
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.813
ELB improved by 0.0602803
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.765
ELB improved by 0.0479541
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.727
ELB improved by 0.0385662
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.695
ELB improved by 0.0313228
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.67
ELB improved by 0.0256717
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.648
ELB improved by 0.0212199
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.631
ELB improved by 0.0176826
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.616
ELB improved by 0.0148499
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.603
ELB improved by 0.0125655
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.593
ELB improved by 0.0107112
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.583
ELB improved by 0.00919709
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.830 0.228 3.065
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.089 | 0.017 | 0.105 | |
| getPIPs | 0.083 | 0.013 | 0.096 | |
| graper | 0.134 | 0.018 | 0.153 | |
| makeExampleData | 0.012 | 0.001 | 0.014 | |
| makeExampleDataWithUnequalGroups | 0.037 | 0.004 | 0.041 | |
| plotELBO | 0.268 | 0.018 | 0.286 | |
| plotGroupPenalties | 0.757 | 0.024 | 0.786 | |
| plotPosterior | 0.610 | 0.019 | 0.629 | |
| predict.graper | 3.078 | 0.082 | 3.172 | |
| print.graper | 0.081 | 0.013 | 0.096 | |