Back to Using R 4.1.3 to BUILD/CHECK a small subset of 3.18 packages

This page was generated on 2024-03-08 16:41:48 -0500 (Fri, 08 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 655
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Package 35/118HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DelayedArray 0.28.0  (landing page)
Hervé Pagès
Snapshot Date: 2024-03-08 15:25:35 -0500 (Fri, 08 Mar 2024)
git_url: https://git.bioconductor.org/packages/DelayedArray
git_branch: RELEASE_3_18
git_last_commit: 4f63877
git_last_commit_date: 2023-10-24 10:54:24 -0500 (Tue, 24 Oct 2023)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  

INSTALL results for DelayedArray on nebbiolo2


To the developers/maintainers of the DelayedArray package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: DelayedArray
Version: 0.28.0
Command: /home/hpages/bbs-3.18-bioc-R41/R/bin/R CMD INSTALL DelayedArray
StartedAt: 2024-03-08 15:30:49 -0500 (Fri, 08 Mar 2024)
EndedAt: 2024-03-08 15:31:18 -0500 (Fri, 08 Mar 2024)
EllapsedTime: 28.3 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/hpages/bbs-3.18-bioc-R41/R/bin/R CMD INSTALL DelayedArray
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* installing to library ‘/home/hpages/bbs-3.18-bioc-R41/R/site-library’
* installing *source* package ‘DelayedArray’ ...
** using staged installation
** libs
gcc -I"/home/hpages/bbs-3.18-bioc-R41/R/include" -DNDEBUG  -I'/home/hpages/bbs-3.18-bioc-R41/R/site-library/S4Vectors/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c R_init_DelayedArray.c -o R_init_DelayedArray.o
gcc -I"/home/hpages/bbs-3.18-bioc-R41/R/include" -DNDEBUG  -I'/home/hpages/bbs-3.18-bioc-R41/R/site-library/S4Vectors/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c S4Vectors_stubs.c -o S4Vectors_stubs.o
gcc -I"/home/hpages/bbs-3.18-bioc-R41/R/include" -DNDEBUG  -I'/home/hpages/bbs-3.18-bioc-R41/R/site-library/S4Vectors/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c compress_atomic_vector.c -o compress_atomic_vector.o
gcc -shared -L/home/hpages/bbs-3.18-bioc-R41/R/lib -L/usr/local/lib -o DelayedArray.so R_init_DelayedArray.o S4Vectors_stubs.o compress_atomic_vector.o -L/home/hpages/bbs-3.18-bioc-R41/R/lib -lR
installing to /home/hpages/bbs-3.18-bioc-R41/R/site-library/00LOCK-DelayedArray/00new/DelayedArray/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘apply’ in package ‘DelayedArray’
Creating a new generic function for ‘sweep’ in package ‘DelayedArray’
Creating a new generic function for ‘scale’ in package ‘DelayedArray’
Creating a generic function for ‘dnorm’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘pnorm’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qnorm’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘dbinom’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘pbinom’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qbinom’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘dpois’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘ppois’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qpois’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘dlogis’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘plogis’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qlogis’ from package ‘stats’ in package ‘DelayedArray’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (DelayedArray)