Back to Multiple platform build/check report for BioC 3.16
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-07-11 11:06:42 -0400 (Mon, 11 Jul 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4148
lconwaymacOS 12.2.1 Montereyx86_644.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" 4168
kjohnsonmacOS 12.4 Montereyarm644.2.1 (2022-06-23) -- "Funny-Looking Kid" 3545
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for cellxgenedp on kjohnson


To the developers/maintainers of the cellxgenedp package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/cellxgenedp.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 282/2130HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cellxgenedp 1.1.1  (landing page)
Martin Morgan
Snapshot Date: 2022-07-10 14:00:02 -0400 (Sun, 10 Jul 2022)
git_url: https://git.bioconductor.org/packages/cellxgenedp
git_branch: master
git_last_commit: 192b769
git_last_commit_date: 2022-05-13 14:29:34 -0400 (Fri, 13 May 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    ERROR  
lconwaymacOS 12.2.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnsonmacOS 12.4 Monterey / arm64  OK    NA    NA    NA  

Summary

Package: cellxgenedp
Version: 1.1.1
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL cellxgenedp
StartedAt: 2022-07-10 16:45:22 -0400 (Sun, 10 Jul 2022)
EndedAt: 2022-07-10 16:46:08 -0400 (Sun, 10 Jul 2022)
EllapsedTime: 46.3 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL cellxgenedp
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library’
* installing *source* package ‘cellxgenedp’ ...
** using staged installation
** libs
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/cpp11/include' -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c cpp11.cpp -o cpp11.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/cpp11/include' -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c jsoncons_jmespath.cpp -o jsoncons_jmespath.o
clang++ -arch arm64 -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o cellxgenedp.so cpp11.o jsoncons_jmespath.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/00LOCK-cellxgenedp/00new/cellxgenedp/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cellxgenedp)