Raphael Gottardo
| Snapshot Date: 2022-07-10 14:00:02 -0400 (Sun, 10 Jul 2022) |
| git_url: https://git.bioconductor.org/packages/bridge |
| git_branch: master |
| git_last_commit: 7745847 |
| git_last_commit_date: 2022-04-26 10:57:06 -0400 (Tue, 26 Apr 2022) |
| Back to Multiple platform build/check report for BioC 3.16 |
|
This page was generated on 2022-07-11 11:06:41 -0400 (Mon, 11 Jul 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4148 |
| lconway | macOS 12.2.1 Monterey | x86_64 | 4.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" | 4168 |
| kjohnson | macOS 12.4 Monterey | arm64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 3545 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the bridge package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/bridge.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 223/2130 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| bridge 1.61.0 (landing page) Raphael Gottardo
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| lconway | macOS 12.2.1 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| kjohnson | macOS 12.4 Monterey / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
| Package: bridge |
| Version: 1.61.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL bridge |
| StartedAt: 2022-07-10 15:07:12 -0400 (Sun, 10 Jul 2022) |
| EndedAt: 2022-07-10 15:07:14 -0400 (Sun, 10 Jul 2022) |
| EllapsedTime: 1.6 seconds |
| RetCode: 1 |
| Status: ERROR |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL bridge
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library’
* installing *source* package ‘bridge’ ...
** using staged installation
** libs
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c bridge2.affy.c -o bridge2.affy.o
bridge2.affy.c:37:7: warning: unused variable 'count_model' [-Wunused-variable]
int count_model=0;
^
bridge2.affy.c:36:7: warning: unused variable 'old_model' [-Wunused-variable]
int old_model;
^
bridge2.affy.c:302:3: error: implicit declaration of function 'dirichlet' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
dirichlet(gamma, 2, w);
^
bridge2.affy.c:302:3: note: did you mean 'dirichlet2'?
bridge2.affy.c:10:6: note: 'dirichlet2' declared here
void dirichlet2(double *gamma, int n, double *w);
^
bridge2.affy.c:282:10: warning: unused variable 'w_new' [-Wunused-variable]
double w_new[2];
^
3 warnings and 1 error generated.
make: *** [bridge2.affy.o] Error 1
ERROR: compilation failed for package ‘bridge’
* removing ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/bridge’