Martin Morgan
| Snapshot Date: 2022-07-10 14:00:02 -0400 (Sun, 10 Jul 2022) |
| git_url: https://git.bioconductor.org/packages/BiocParallel |
| git_branch: master |
| git_last_commit: 790c719 |
| git_last_commit_date: 2022-07-07 11:12:44 -0400 (Thu, 07 Jul 2022) |
| Back to Multiple platform build/check report for BioC 3.16 |
|
This page was generated on 2022-07-11 11:06:40 -0400 (Mon, 11 Jul 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4148 |
| lconway | macOS 12.2.1 Monterey | x86_64 | 4.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" | 4168 |
| kjohnson | macOS 12.4 Monterey | arm64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 3545 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the BiocParallel package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BiocParallel.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 166/2130 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BiocParallel 1.31.10 (landing page) Martin Morgan
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.2.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson | macOS 12.4 Monterey / arm64 | OK | ERROR | skipped | skipped | |||||||||
| Package: BiocParallel |
| Version: 1.31.10 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BiocParallel |
| StartedAt: 2022-07-10 21:57:34 -0400 (Sun, 10 Jul 2022) |
| EndedAt: 2022-07-10 21:59:04 -0400 (Sun, 10 Jul 2022) |
| EllapsedTime: 90.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BiocParallel ### ############################################################################## ############################################################################## * checking for file ‘BiocParallel/DESCRIPTION’ ... OK * preparing ‘BiocParallel’: * checking DESCRIPTION meta-information ... OK * cleaning src * running ‘cleanup’ * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘BiocParallel_BatchtoolsParam.Rnw’ using knitr --- finished re-building ‘BiocParallel_BatchtoolsParam.Rnw’ --- re-building ‘Errors_Logs_And_Debugging.Rnw’ using knitr --- finished re-building ‘Errors_Logs_And_Debugging.Rnw’ --- re-building ‘Introduction_To_BiocParallel.Rnw’ using knitr Quitting from lines 14-21 (Introduction_To_BiocParallel.Rnw) Error: processing vignette 'Introduction_To_BiocParallel.Rnw' failed with diagnostics: there is no package called 'VariantAnnotation' --- failed re-building ‘Introduction_To_BiocParallel.Rnw’ --- re-building ‘Random_Numbers.Rnw’ using knitr --- finished re-building ‘Random_Numbers.Rnw’ SUMMARY: processing the following file failed: ‘Introduction_To_BiocParallel.Rnw’ Error: Vignette re-building failed. Execution halted