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This page was generated on 2022-03-18 11:08:04 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for MOMA on riesling1


To the developers/maintainers of the MOMA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MOMA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1198/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MOMA 1.7.0  (landing page)
Sunny Jones
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/MOMA
git_branch: master
git_last_commit: 9ac35a3
git_last_commit_date: 2021-10-26 12:59:21 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: MOMA
Version: 1.7.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL MOMA
StartedAt: 2022-03-17 15:56:11 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 15:57:11 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 60.8 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL MOMA
###
##############################################################################
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'MOMA' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MOMA'
    finding HTML links ... done
    Moma-class                              html  
    areaEnrich                              html  
    associateEvents                         html  
    checkGeneMap                            html  
    checkList                               html  
    checkMAE                                html  
    checkPathways                           html  
    clusterRange                            html  
    clusterReliability                      html  
    cnvScoreStouffer                        html  
    conditionalModel                        html  
    conditionalP                            html  
    empiricalP                              html  
    example.gbm.mae                         html  
    fitCurvePercent                         html  
    gbm.pathways                            html  
    gene.map                                html  
    genomicPlotSmall                        html  
    getCoverage                             html  
    getDataFrame                            html  
    getDiggitEmpiricalQvalues               html  
    getEmpiricalQvals                       html  
    getPvalsMatrix                          html  
    getSubtypeEventTables                   html  
    integrateFunction                       html  
    integrateTZ                             html  
    makeCoverageDf                          html  
    makeSaturationPlots                     html  
    mapEntrez                               html  
    mapHugo                                 html  
    mapScoresCnvBand                        html  
    mergeData                               html  
    mergeDataBySubtype                      html  
    mergeGenomicSaturation                  html  
    mergeLists                              html  
    momaConstructor                         html  
    mutSig                                  html  
    oncoprintPlot                           html  
    pathwayDiggitIntersect                  html  
    plotEvents                              html  
    rea                                     html  
    reaNULL                                 html  
    sREA                                    html  
    sampleNameFilter                        html  
    sampleOverlap                           html  
    sigInteractorsDIGGIT                    html  
    stoufferIntegrate                       html  
    stoufferIntegrateDiggit                 html  
    subsetListInteractions                  html  
    validDiggitInteractions                 html  
    viperGetSigTFS                          html  
    viperGetTFScores                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MOMA)
Making 'packages.html' ... done