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INSTALL report for biomaRt on tokay2

This page was generated on 2020-04-15 03:20:11 -0400 (Wed, 15 Apr 2020).

These builds are using Rtools40 and R-testing by Jeroen Ooms (available at https://cran.r-project.org/bin/windows/testing/rtools40.html)
TO THE DEVELOPERS/MAINTAINERS OF THE biomaRt PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 20/89HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biomaRt 2.43.5
Mike Smith
Snapshot Date: 2020-04-14 17:00:05 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/biomaRt
Branch: master
Last Commit: c46e858
Last Changed Date: 2020-04-01 13:13:55 -0400 (Wed, 01 Apr 2020)
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK 

Summary

Package: biomaRt
Version: 2.43.5
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/biomaRt_2.43.5.tar.gz && rm -rf biomaRt.buildbin-libdir && mkdir biomaRt.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomaRt.buildbin-libdir biomaRt_2.43.5.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL biomaRt_2.43.5.zip && rm biomaRt_2.43.5.tar.gz biomaRt_2.43.5.zip
StartedAt: 2020-04-14 18:20:52 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 18:21:18 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 26.5 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/biomaRt_2.43.5.tar.gz && rm -rf biomaRt.buildbin-libdir && mkdir biomaRt.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomaRt.buildbin-libdir biomaRt_2.43.5.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL biomaRt_2.43.5.zip && rm biomaRt_2.43.5.tar.gz biomaRt_2.43.5.zip
###
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install for i386

* installing *source* package 'biomaRt' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'biomaRt'
    finding HTML links ... done
    Mart-class                              html  
    NP2009code                              html  
    attributePages                          html  
    biomartCache                            html  
    exportFASTA                             html  
    filterOptions                           html  
    filterType                              html  
    getBM                                   html  
    getBMlist                               html  
    getGene                                 html  
    getLDS                                  html  
    getSequence                             html  
    getXML                                  html  
    listAttributes                          html  
    listDatasets                            html  
    listEnsembl                             html  
    listEnsemblArchives                     html  
    listFilterValues                        html  
    listFilters                             html  
    listMarts                               html  
    select                                  html  
    useDataset                              html  
    useEnsembl                              html  
    useMart                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'biomaRt' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'biomaRt' as biomaRt_2.43.5.zip
* DONE (biomaRt)
* installing to library 'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library'
package 'biomaRt' successfully unpacked and MD5 sums checked