Package: XhybCasneuf

Version: 1.0.6

Command: E:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --no-vignettes --timings --no-multiarch XhybCasneuf_1.0.6.tar.gz

StartedAt: 2011-07-06 16:22:47 -0700 (Wed, 06 Jul 2011)

EndedAt: 2011-07-06 16:24:36 -0700 (Wed, 06 Jul 2011)

EllapsedTime: 108.8 seconds

RetCode: 0

Status:  OK

CheckDir: XhybCasneuf.Rcheck

Warnings: 0

* using log directory 'E:/biocbld/bbs-2.9-data-experiment/meat/XhybCasneuf.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-06-03 r56036)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'XhybCasneuf/DESCRIPTION' ... OK
* this is package 'XhybCasneuf' version '1.0.6'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'XhybCasneuf' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package 'XhybCasneuf' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.


Attaching package: 'tinesath1cdf'

The following object(s) are masked from 'package:ath1121501cdf':

    i2xy, xy2i

** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'Xhyb.Rnw' 
** testing if installed package can be loaded

* DONE (XhybCasneuf)

name	user	system	elapsed
AffysTissue	0.46	0.00	0.46
CustomsTissue	0.25	0.01	0.26
XhybExamples-class	0.17	0.02	0.36
ex1	0.04	0.00	0.13
runSimulation	0.05	0.00	0.18