Package: biocGraph

Version: 1.16.1

Command: rm -rf biocGraph.buildbin-libdir && mkdir biocGraph.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --no-multiarch --library=biocGraph.buildbin-libdir biocGraph_1.16.1.tar.gz

StartedAt: 2012-01-09 06:24:05 -0800 (Mon, 09 Jan 2012)

EndedAt: 2012-01-09 06:24:15 -0800 (Mon, 09 Jan 2012)

EllapsedTime: 10.6 seconds

RetCode: 0

Status:  OK

PackageFile: biocGraph_1.16.1.zip

PackageFileSize: 567.7 KiB

* installing *source* package 'biocGraph' ...
** R
** inst
** preparing package for lazy loading
Warning in library.dynam("Rgraphviz", package = "Rgraphviz") :
  use of library.dynam() without specifying both 'package' and 'lib.loc' is deprecated
Warning in fun(libname, pkgname) :
  Rgraphviz built with Graphviz version 2.20.3.
Found installed Graphviz version 2.25.20090912.445. This _may_ cause problems.
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "connection" in package 'IRanges' seems equivalent to one from package 'graph' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "file" in package 'IRanges' seems equivalent to one from package 'graph' and is not turning on duplicate class definitions for this class
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'biocGraph.Rnw' 
   'layingOutPathways.Rnw' 
** testing if installed package can be loaded
Warning in library.dynam("Rgraphviz", package = "Rgraphviz") :
  use of library.dynam() without specifying both 'package' and 'lib.loc' is deprecated
Warning message:
In fun(libname, pkgname) : Rgraphviz built with Graphviz version 2.20.3.
Found installed Graphviz version 2.25.20090912.445. This _may_ cause problems.
* MD5 sums
packaged installation of 'biocGraph' as biocGraph_1.16.1.zip

* DONE (biocGraph)