Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N [O] P  Q  R  S  T  U  V  W  X  Y  Z 

Package 446/658HostnameOS / ArchBUILDCHECKBUILD BIN
OLINgui 1.33.1
Matthias Futschik
Snapshot Date: 2013-03-24 17:01:43 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/OLINgui
Last Changed Rev: 73729 / Revision: 74774
Last Changed Date: 2013-02-25 10:20:33 -0800 (Mon, 25 Feb 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: OLINgui
Version: 1.33.1
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch OLINgui_1.33.1.tar.gz
StartedAt: 2013-03-25 03:51:01 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 03:51:57 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 55.8 seconds
RetCode: 0
Status:  OK 
CheckDir: OLINgui.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.12-bioc/meat/OLINgui.Rcheck'
* using R Under development (unstable) (2013-02-26 r62077)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'OLINgui/DESCRIPTION' ... OK
* this is package 'OLINgui' version '1.33.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'OLINgui' can be installed ... [5s/5s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
OLINgui : objectBrowser2 : viewEnv: warning in ls(env = env, all =
  TRUE): partial argument match of 'env' to 'envir'
OLINgui : objectBrowser2 : viewEnv: warning in ls(env = env, all =
  TRUE): partial argument match of 'all' to 'all.names'
OLINgui : objectBrowser2 : finish: no visible binding for global
  variable 'h'
OLINgui : browseFile2: no visible binding for global variable 'nenvtmp'
OLINgui : anovapi: no visible binding for global variable 'x'
OLINgui : anovapl: no visible binding for global variable 'x'
OLINgui : anovaintensity: no visible binding for global variable 'x'
OLINgui : anovaspa: no visible binding for global variable 'x'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  '/Users/biocbuild/bbs-2.12-bioc/meat/OLINgui.Rcheck/00check.log'
for details.

OLINgui.Rcheck/00install.out:

* installing *source* package 'OLINgui' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'OLINgui.Rnw' 
** testing if installed package can be loaded
* DONE (OLINgui)