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hapmap100khind 1.3.35
Benilton Carvalho
Snapshot Date: 2012-06-21 11:15:08 -0700 (Thu, 21 Jun 2012)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/hapmap100khind
Last Changed Rev: 2037 / Revision: 2088
Last Changed Date: 2012-03-30 15:20:09 -0700 (Fri, 30 Mar 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: hapmap100khind
Version: 1.3.35
Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch hapmap100khind_1.3.35.tar.gz
StartedAt: 2012-06-21 14:40:02 -0700 (Thu, 21 Jun 2012)
EndedAt: 2012-06-21 14:40:38 -0700 (Thu, 21 Jun 2012)
EllapsedTime: 35.9 seconds
RetCode: 0
Status:  OK 
CheckDir: hapmap100khind.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.11-data-experiment/meat/hapmap100khind.Rcheck'
* using R version 2.15.0 Patched (2012-04-26 r59216)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'hapmap100khind/DESCRIPTION' ... OK
* this is package 'hapmap100khind' version '1.3.35'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'hapmap100khind' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 73.5Mb
  sub-directories of 1Mb or more:
    celFiles  73.4Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File 'hapmap100khind/R/zzz.R':
  .onLoad calls:
    message(paste("/-------------------------------------------\\",     "|         SAMPLE HAPMAP 100K HIND           |", "|-------------------------------------------|",     "| Data obtained from http://www.hapmap.org  |", "| This package is meant to be used only for |",     "| demonstration of BioConductor packages.   |", "| Access http://www.hapmap.org for details. |",     "|-------------------------------------------|", "| The contents of this package are provided |",     "| in good faith and the maintainer does not |", "| warrant their accuracy.                   |",     "\\-------------------------------------------/", sep = "\n"))

Package startup functions should use 'packageStartupMessage' to
  generate messages.
See section 'Good practice' in ?.onAttach.

* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  '/Users/biocbuild/bbs-2.11-data-experiment/meat/hapmap100khind.Rcheck/00check.log'
for details.

hapmap100khind.Rcheck/00install.out:

* installing *source* package 'hapmap100khind' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
/-------------------------------------------\
|         SAMPLE HAPMAP 100K HIND           |
|-------------------------------------------|
| Data obtained from http://www.hapmap.org  |
| This package is meant to be used only for |
| demonstration of BioConductor packages.   |
| Access http://www.hapmap.org for details. |
|-------------------------------------------|
| The contents of this package are provided |
| in good faith and the maintainer does not |
| warrant their accuracy.                   |
\-------------------------------------------/

* DONE (hapmap100khind)

hapmap100khind.Rcheck/hapmap100khind-Ex.timings:

nameusersystemelapsed
hapmap100khind-package000