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Package 31/122HostnameOS / ArchBUILDCHECKBUILD BIN
dressCheck 0.1.5
Vincent Carey
Snapshot Date: 2012-06-21 11:15:08 -0700 (Thu, 21 Jun 2012)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/dressCheck
Last Changed Rev: 2037 / Revision: 2088
Last Changed Date: 2012-03-30 15:20:09 -0700 (Fri, 30 Mar 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: dressCheck
Version: 0.1.5
Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch dressCheck_0.1.5.tar.gz
StartedAt: 2012-06-21 14:20:35 -0700 (Thu, 21 Jun 2012)
EndedAt: 2012-06-21 14:21:48 -0700 (Thu, 21 Jun 2012)
EllapsedTime: 73.4 seconds
RetCode: 0
Status:  OK 
CheckDir: dressCheck.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.11-data-experiment/meat/dressCheck.Rcheck'
* using R version 2.15.0 Patched (2012-04-26 r59216)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'dressCheck/DESCRIPTION' ... OK
* this is package 'dressCheck' version '0.1.5'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'dressCheck' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 65.8Mb
  sub-directories of 1Mb or more:
    data         54.4Mb
    sampleRemap  11.2Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: DrAsGiven.Rd:69-71: Dropping empty section \details
prepare_Rd: DrAsGiven.Rd:72-74: Dropping empty section \source
prepare_Rd: DrAsGiven.Rd:75-77: Dropping empty section \references
prepare_Rd: E2F3sig.probes.Rd:16-18: Dropping empty section \details
prepare_Rd: E2F3sig.probes.Rd:19-21: Dropping empty section \source
prepare_Rd: E2F3sig.probes.Rd:22-24: Dropping empty section \references
prepare_Rd: Src.probes.Rd:17-19: Dropping empty section \details
prepare_Rd: Src.probes.Rd:20-22: Dropping empty section \source
prepare_Rd: Src.probes.Rd:23-25: Dropping empty section \references
prepare_Rd: c119.Rd:97-99: Dropping empty section \source
prepare_Rd: c119.Rd:100-102: Dropping empty section \references
prepare_Rd: corrp116.Rd:71-73: Dropping empty section \details
prepare_Rd: corrp116.Rd:74-76: Dropping empty section \source
prepare_Rd: corrp116.Rd:77-79: Dropping empty section \references
prepare_Rd: e2f3Wts.Rd:19-21: Dropping empty section \details
prepare_Rd: e2f3Wts.Rd:22-24: Dropping empty section \source
prepare_Rd: e2f3Wts.Rd:25-27: Dropping empty section \references
prepare_Rd: platsigprobes.Rd:17-19: Dropping empty section \details
prepare_Rd: platsigprobes.Rd:20-22: Dropping empty section \source
prepare_Rd: platsigprobes.Rd:23-25: Dropping empty section \references
prepare_Rd: pwLines.Rd:127-129: Dropping empty section \details
prepare_Rd: pwLines.Rd:130-132: Dropping empty section \source
prepare_Rd: pwLines.Rd:133-135: Dropping empty section \references
prepare_Rd: srcWts.Rd:19-21: Dropping empty section \details
prepare_Rd: srcWts.Rd:22-24: Dropping empty section \source
prepare_Rd: srcWts.Rd:25-27: Dropping empty section \references
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... NOTE
The following files should probably not be installed:
  'mismatch.tex'

Consider the use of a .Rinstignore file: see 'Writing R Extensions',
or move the vignette sources from 'inst/doc' to 'vignettes'.
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There were 3 notes.
See
  '/Users/biocbuild/bbs-2.11-data-experiment/meat/dressCheck.Rcheck/00check.log'
for details.

dressCheck.Rcheck/00install.out:

* installing *source* package 'dressCheck' ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
   'short.Rnw' 
** testing if installed package can be loaded

* DONE (dressCheck)

dressCheck.Rcheck/dressCheck-Ex.timings:

nameusersystemelapsed
DrAsGiven1.9770.1292.283
E2F3sig.probes0.0020.0010.013
Src.probes0.0020.0010.010
c1193.0280.1933.953
corrp1161.9350.1363.151
e2f3Wts0.0020.0010.023
platsigprobes0.0030.0010.004
pwLines3.9510.2895.170
srcWts0.0020.0010.003