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NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier
Package 73/238HostnameOSArchBUILDCHECKBUILD BIN

flowUtils

0.2.3

Florian Hahne
Last Changed Date: 2007-05-26 11:41:03 -0700
Last Changed Rev: 25004
lamb1 Linux (SUSE 10.1) x86_64  OK [ ERROR ]
wellington Linux (SUSE 9.2) i686  OK  ERROR 
churchill Solaris 2.9 sparc  OK  ERROR 
lemming Windows Server 2003 (32-bit) x64  OK  ERROR skipped
Package: flowUtils
Version: 0.2.3
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check flowUtils_0.2.3.tar.gz
RetCode: 1
Time: 5.5 seconds
Status: ERROR
CheckDir: flowUtils.Rcheck
Warnings: NA

Command output

* checking for working latex ... OK
* using log directory '/home/biocbuild/bbs-2.1-bioc/meat/flowUtils.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-06-03 r41797)
* checking for file 'flowUtils/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'flowUtils' version '0.2.3'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'flowUtils' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... ERROR
Loading required package: flowCore
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: rrcov
Scalable Robust Estimators with High Breakdown Point (version 0.3-05)
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: XML
Error in eval(expr, envir, enclos) : object "w" not found
Error : unable to load R code in package 'flowUtils'
Error: package/namespace load failed for 'flowUtils'
Execution halted

It looks like this package has a loading problem: see the messages for
details.

flowUtils.Rcheck/00install.out:

* Installing *source* package 'flowUtils' ...
** R
** inst
** help
 >>> Building/Updating help pages for package 'flowUtils'
     Formats: text html latex example 
  flowUtil-package                  text    html    latex   example
  read.gatingML                     text    html    latex   example
** building package indices ...
* DONE (flowUtils)