fdrame

FDR adjustments of Microarray Experiments (FDR-AME)

This package contains two main functions. The first is fdr.ma which takes normalized expression data array, experimental design and computes adjusted p-values It returns the fdr adjusted p-values and plots, according to the methods described in (Reiner, Yekutieli and Benjamini 2002). The second, is fdr.gui() which creates a simple graphic user interface to access fdr.ma

Author Yoav Benjamini, Effi Kenigsberg, Anat Reiner, Daniel Yekutieli
Maintainer Effi Kenigsberg

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("fdrame")

Documentation

Annotation Overview PDF R Script
Reference Manual

Details

biocViews
Depends
tcltk
Imports
Suggests
System Requirements
License GPL Version 2 or later.
URL
Depends On Me
Imports Me
Suggests Me
Development History Bioconductor Changelog

Package Downloads

Package source fdrame_1.16.0.tar.gz
Windows binary fdrame_1.16.0.zip
MacOS X 10.4 (Tiger) binary fdrame_1.16.0.tgz
MacOS X 10.5 (Leopard) binary fdrame_1.16.0.tgz
Package Downloads Report Downloads Stats