flowQB

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see flowQBData.

Automated Quadratic Characterization of Flow Cytometer Instrument Sensitivity: Q, B and CV instrinsic calculations


Bioconductor version: 3.9

flowQB is a fully automated R Bioconductor package to calculate automatically the detector efficiency (Q), optical background (B) and intrinsic CV of the beads.

Author: Josef Spidlen, Faysal El Khettabi, Wayne Moore, David Parks, Ryan Brinkman

Maintainer: Josef Spidlen <jspidlen at gmail.com>

Citation (from within R, enter citation("flowQB")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowQB")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowQB")
flowQB package PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews FlowCytometry, ImmunoOncology, MultiChannel, OneChannel, PeakDetection, QualityControl, Regression, Software
Version 2.11.1
In Bioconductor since BioC 2.11 (R-2.15) (11.5 years)
License Artistic-2.0
Depends
Imports methods, flowCore(>= 1.32.0), stats, extremevalues
System Requirements
URL
See More
Suggests flowQBData, FlowRepositoryR, xlsx, RUnit, BiocGenerics
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me flowQBData
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowQB_2.11.1.tar.gz
Windows Binary flowQB_2.11.1.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) flowQB_2.11.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowQB
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowQB
Bioc Package Browser https://code.bioconductor.org/browse/flowQB/
Package Short Url https://bioconductor.org/packages/flowQB/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive