QUALIFIER

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see QUALIFIER.

Quality Control of Gated Flow Cytometry Experiments


Bioconductor version: 3.9

Provides quality control and quality assessment tools for gated flow cytometry data.

Author: Mike Jiang,Greg Finak,Raphael Gottardo

Maintainer: Mike Jiang <wjiang2 at fhcrc.org>

Citation (from within R, enter citation("QUALIFIER")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("QUALIFIER")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("QUALIFIER")
Quick plot for cytometry data HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software
Version 1.28.0
In Bioconductor since BioC 2.10 (R-2.15) (12 years)
License Artistic-2.0
Depends R (>= 2.14.0), flowCore, flowViz, ncdfFlow, flowWorkspace, data.table, reshape
Imports MASS, hwriter, lattice, stats4, flowCore, flowViz, methods, flowWorkspace, latticeExtra, grDevices, tools, Biobase, XML, grid
System Requirements
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Suggests RSVGTipsDevice, knitr
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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package QUALIFIER_1.28.0.tar.gz
Windows Binary QUALIFIER_1.28.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) QUALIFIER_1.28.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/QUALIFIER
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/QUALIFIER
Bioc Package Browser https://code.bioconductor.org/browse/QUALIFIER/
Package Short Url https://bioconductor.org/packages/QUALIFIER/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive