CGEN

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see CGEN.

An R package for analysis of case-control studies in genetic epidemiology


Bioconductor version: 3.9

An R package for analysis of case-control studies in genetic epidemiology.

Author: Samsiddhi Bhattacharjee, Nilanjan Chatterjee, Summer Han, Minsun Song and William Wheeler

Maintainer: William Wheeler <wheelerb at imsweb.com>

Citation (from within R, enter citation("CGEN")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CGEN")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CGEN")
CGEN Scan Vignette PDF R Script
CGEN Vignette PDF R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews Clustering, MultipleComparisons, SNP, Software
Version 3.20.0
In Bioconductor since BioC 2.7 (R-2.12) (13.5 years)
License GPL-2 + file LICENSE
Depends R (>= 2.10.1), survival, mvtnorm
Imports
System Requirements
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Suggests cluster
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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package CGEN_3.20.0.tar.gz
Windows Binary CGEN_3.20.0.zip
Mac OS X 10.11 (El Capitan) CGEN_3.20.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/CGEN
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/CGEN
Bioc Package Browser https://code.bioconductor.org/browse/CGEN/
Package Short Url https://bioconductor.org/packages/CGEN/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive