Bioconductor Single Package Builder - Build History

Snapshot Date:

URL: https://git.bioconductor.org/packages/mosdef

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
nebbiolo1	Linux (Ubuntu 22.04.3 LTS)/x86_64	ERROR	skipped	skipped	skipped

nebbiolo1 Summary

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Package: mosdef

Version: 0.99.0

RVersion: 4.4

BiocVersion: 3.19

BuildCommand: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data mosdef

BuildTime: 4 minutes 37.54 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: mosdef_20240322192642

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: mosdef. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1.

nebbiolo1 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file mosdef/DESCRIPTION ... OK
* preparing mosdef:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building mosdef_userguide.Rmd using rmarkdown
Warning: ggrepel: 22 unlabeled data points (too many overlaps). Consider increasing max.overlaps

Quitting from lines 583-584 [sessioninfo] (mosdef_userguide.Rmd)
Error: processing vignette 'mosdef_userguide.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building mosdef_userguide.Rmd

SUMMARY: processing the following file failed:
  mosdef_userguide.Rmd

Error: Vignette re-building failed.
Execution halted

nebbiolo1 CHECK output

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nebbiolo1 BUILD BIN output

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