## ---- echo=FALSE, results="hide", message=FALSE---------------------------- require(knitr) opts_chunk$set(error=FALSE, message=FALSE, warning=FALSE) ## ----style, echo=FALSE, results='asis'------------------------------------- BiocStyle::markdown() ## -------------------------------------------------------------------------- library(TENxPBMCData) tenx_pbmc4k <- TENxPBMCData(dataset = "pbmc4k") tenx_pbmc4k ## -------------------------------------------------------------------------- args(TENxPBMCData) ## -------------------------------------------------------------------------- counts(tenx_pbmc4k) ## -------------------------------------------------------------------------- options(DelayedArray.block.size=1e9) ## ---- eval = FALSE--------------------------------------------------------- # lib.sizes <- colSums(counts(tenx_pbmc4k)) # n.exprs <- colSums(counts(tenx_pbmc4k) != 0L) # ave.exprs <- rowMeans(counts(tenx_pbmc4k)) ## ---- eval=FALSE----------------------------------------------------------- # destination <- tempfile() # saveRDS(tenx_pbmc4k, file = destination) ## -------------------------------------------------------------------------- sessionInfo()