To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SigFuge")

In most cases, you don't need to download the package archive at all.

SigFuge

This package is for version 2.13 of Bioconductor; for the stable, up-to-date release version, see SigFuge.

Bioconductor version: 2.13

Algorithm for testing significance of clustering in RNA-seq data.

Author: Patrick Kimes, Christopher Cabanski

Maintainer: Patrick Kimes <pkimes at live.unc.edu>

Citation (from within R, enter citation("SigFuge")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SigFuge")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SigFuge")

PDF	R Script	SigFuge Tutorial
PDF		Reference Manual

biocViews	Clustering, RNAseq, Software, Visualization
Version	1.0.2
In Bioconductor since	BioC 2.13 (R-3.0) (2.5 years)
License	GPL-3
Depends	R (>= 3.0.2), GenomicRanges
Imports	ggplot2, matlab, reshape, sigclust
LinkingTo
Suggests	org.Hs.eg.db, prebsdata, Rsamtools, TxDb.Hsapiens.UCSC.hg19.knownGene, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	SigFuge_1.0.2.tar.gz
Windows Binary	SigFuge_1.0.2.zip
Mac OS X 10.6 (Snow Leopard)	SigFuge_1.0.2.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/SigFuge/tree/release-2.13
Package Short Url	http://bioconductor.org/packages/SigFuge/
Package Downloads Report	Download Stats

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